Journal Article
Genomewide SNP data reveal cryptic phylogeographic structure and microallopatric divergence in a rapids adapted clade of cichlids from the Congo River
Alter, S.E., Munshi-South, J. and Stiassny, M.L.J.
Record Number:
3761
Year:
2017
Journal:
Molecular Ecology
Pages:
1401-1419
Volume:
26
Abstract:
The lower Congo River is a freshwater biodiversity hot spot in Africa characterized by
some of the world’s largest rapids. However, little is known about the evolutionary
forces shaping this diversity, which include numerous endemic fishes. We investigated
phylogeographic relationships in Teleogramma, a small clade of rheophilic cichlids, in
the context of regional geography and hydrology. Previous studies have been unable
to resolve phylogenetic relationships within Teleogramma due to lack of variation in
nuclear genes and discrete morphological characters among putative species. To sample
more broadly across the genome, we analysed double-digest restriction-associated
sequencing (ddRAD) data from 53 individuals across all described species in the
genus. We also assessed body shape and mitochondrial variation within and between
taxa. Phylogenetic analyses reveal previously unrecognized lineages and instances of
microallopatric divergence across as little as ~1.5 km. Species ranges appear to correspond
to geographic regions broadly separated by major hydrological and topographic
barriers, indicating these features are likely important drivers of diversification.
Mitonuclear discordance indicates one or more introgressive hybridization events, but
no clear evidence of admixture is present in nuclear genomes, suggesting these events
were likely ancient. A survey of female fin patterns hints that previously undetected
lineage-specific patterning may be acting to reinforce species cohesion. These analyses
highlight the importance of hydrological complexity in generating diversity in certain
freshwater systems, as well as the utility of ddRAD-Seq data in understanding diversification processes operating both below and above the species level.
Times Cited:
7
Relevent Species:
Lamprologus lethops Roberts and Stewart 1976Mastacembelus aviceps Roberts and Stewart 1976Mastacembelus brichardi (Poll 1958) Roberts and Stewart 1976Mastacembelus crassus Roberts and Stewart 1976Mastacembelus latens Roberts and Stewart 1976Stomatorhinus microps Boulenger 1898Dolichallabes microphthalmus Poll 1942