Journal Article

The complete mitochondrial genome of Triplophysa brevibarba with phylogenetic consideration

Zhang, Y., Wang, Z., Zhang, Z., Wu, M.. Chen, J. and Zhao, Y.

Record Number:
3770
Year:
2018
Journal:
Conservation Genetics Resources
Pages:
79-83
Volume:
10
PMCID:
http://dx.doi.org/10.1007/s12686-017-0769-2
Abstract:
Abstract Triplophysa brevibarba is distributed in the upstream of Ya-lung River. The conservation status of this fish has been assessed as near threatened due to overfishing and habitat destruction. In the present study, we determined the first complete mitochondrial genome of T. brevibarba. This genome was 16,570 bp in size and contained 13 protein- coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a typical control region. The overall nucleotide composition was: 28.2% A, 28.5% T, 25.3% C, and 18.0% G, with a total A + T content of 56.7%. The genome size, gene arrangement, and composition were similar to those of other Triplophysa species. Phylogenetic analysis of all 42 Nemacheilidae species showed that Triplophysa is a monophyletic group and T. brevibarba was clustered with Triplophysa minxiannesis and Triplophysa robusta located in the basal clade of Triplophysa
Times Cited:
23
Relevent Species:
Triplophysa yunnanensis Yang in Wu 1990Triplophysa gejiuensis (Chu and Chen 1979) Chen, Yang and Xu 1992Triplophysa xiangxiensis (Yang, Yuan and Liao 1986) Chen, Yang and Xu 1992Triplophysa shilinensis Chen and Yang 1992Triplophysa nandanensis Lan, Yang and Chen 1995Triplophysa aluensis Li and Zhu 2000Troglonectes longibarbatus (Chen, Yang, Sket and Aljancic 1998)Triplophysa tianeensis Chen, Cui and Yang 2004Triplophysa xiangshuingensis Li 2004Triplophysa rosa Chen and Yang 2005Triplophysa qiubeiensis Li, Yang, Chen, Tao, Qi and Han 2008Triplophysa macrocephala Yang, Wu and Yang 2012Troglonectes lihuensis (Wu, Yang and Lan 2012) Li 2018Troglonectes jiarongensis (Lin, Li and Song 2012) Huang, Yang, Wu and Zhao 2019Troglonectes lingyunensis (Liao, Wang and Luo 1997) Kottelat 2012Triplophysa langpingensis Yang in Lan, Gan, Wu and Yang 2013Triplophysa fengshanensis Lan in Lan, Gan, Wu and Yang 2013Troglonectes dongganensis Yang in Lan, Gan, Wu and Yang 2013Triplophysa tianxingensis Yang, Li and Chen 2016Triplophysa tianlinensis Li, Li, Lan and Du 2016Triplophysa microphthalma (Liao and Wang in Liao, Wang and Luo 1997) Kottelat 2012Triplophysa xichouensis Liu, Pan, Yang and Chen 2017Triplophysa luochengensis Li, Lan, Chen and Du 2017